Faculty Publications and Other Works -- General Biology
Submissions from 2017
Student anxiety in introductory biology classrooms: Perceptions about active learning and persistence in the major, Benjamin J. England, Jennifer R. Brigati, and Elisabeth E. Schussler
Submissions from 2016
Draft Genome Sequence of Antarctic Methanogen Enriched from Dry Valley Permafrost, Joy Buongiorno, Jordan T. Bird, Kirill Krivushin, Victoria Oshurkova, Victoria Shcherbakova, Elizaveta M. Rivkina, Karen Lloyd, and Tatiana A. Vishnivetskaya
Submissions from 2015
Transatlantic disjunction in fleshy fungi. II. The Sparassis spathulata – S. brevipes complex, Ronald H. Petersen, Jan Borovička, Ana Reboredo Segovia, and Karen Hughes
Submissions from 2014
Accurate prediction of major histocompatibility complex class II epitopes by sparse representation via ℓ 1-minimization, Clemente Aguilar-Bonavides, Reinaldo Sanchez-Arias, and Cristina Lanzas
Draft Genome Sequences of 10 Strains of the Genus Exiguobacterium, Tatiana A. Vishnivetskaya, Archana Chauhan, Alice C. Layton, Susan M. Pfiffner, Marcel Huntemann, Alex Copeland, Amy Chen, Nikos C. Kyrpides, Victor M. Markowitz, Krishna Palaniappan, Natalia Ivanova, Natalia Mikhailova, Galina Ovchinnikova, Evan W. Andersen, Amrita Pati, Dimitrios Stamatis, T.B.K. Reddy, Nicole Shapiro, Henrik P. Nordberg, Michael N. Cantor, X. Susan Hua, and Tanja Woyke
Submissions from 2013
High variance in reproductive success generates a false signature of a genetic bottleneck in populations of constant size: a simulation study, Sean M. Hoban, Massimo Mezzavilla, Oscar E. Gaggiotti, Andrea Benazzo, Cock van Oosterhout, and Giorgio Bertorelle
Cellular and population plasticity of helper CD4(+) T cell responses, G Magombedze, P B. Reddy, S Eda, and V V. Ganusov
Submissions from 2010
Prodigal: prokaryotic gene recognition and translation initiation site identification, Doug Hyatt, Gwo-Liang Chen, Philip F. LoCascio, Miriam L. Land, Frank W. Larimer, and Loren J. Hauser
Submissions from 2009
PPAR agonists down-regulate the expression of Atp10c mRNA during adipogenesis, A Peretich; Maria Cekanova MS, RNDr, PhD; S Hurst; SJ Baek; and Madhu Dahr
Submissions from 2008
Gene alterations by peroxisome proliferator-activated receptor gamma agonists in human colorectal cancer cells, Maria Cekanova, X Li, J Yuan, K B. Kim, and Seung J. Baek
Differential transferrin expression in placentae from normal and abnormal pregnancies: a pilot study, Alena Kralova, Marta Svetlikova, Jindrich Madar, Zdena Ulcova-Gallova, Antonin Bukovsky, and Jana Peknicova
Hybridization produces novelty when the mapping of form to function is many to one, Nicholas F. Parnell, C Darrin Hulsey, and J. Todd Streelman
Using a literature-based NMF model for discovering gene functional relationships, Elina Tjioe, Michael W. Berry, Ramin Homayouni, and Kevin Heinrich
Efficacy of an ankle orthosis with a subtalar locking system in restricting ankle kinetics and kinematics in lateral cutting, Songning Zhang, Michael Wortley, Qingjian Chen, Julia Freedman, and Casey Riley
Submissions from 2007
NFU-Enabled FASTA: moving bioinformatics applications onto wide area networks, Erich J. Baker, Guan N. Lin, Huadong Liu, and Ravi Kosuri
Genomic and microarray analysis of aromatics degradation in Geobacter metallireducens and comparison to a Geobacter isolate from a contaminated field site, Jessica E. Butler, Qiang He, Kelly P. Nevin, Zhili He, Jizhong Zhou, and Derek R. Lovley
Modeling SAGE tag formation and its effects on data interpretation within a Bayesian framework, Michael A. Gilchrist, Hong Qin, and Russell Zaretzki
On the functions of the h subunit of eukaryotic initiation factor 3 in late stages of translation initiation, Byung-Hoon Kim, Xue Cai, Justin N. Vaughn, and Albrecht G. von Arnim
Distinct phospholipase A2 enzymes regulate prostaglandin E2 and F2alpha production by bovine endometrial epithelial cells, Patricia K. Tithof, Mary P. Roberts, Wei Guan, Mona Elgayyar, and James D. Godkin
Statistical tools for transgene copy number estimation based on real-time PCR, Joshua S. Yuan, Jason N Burris, Nathan R. Stewart, Ayalew Mentewab, and C. Neal Stewart
Submissions from 2006
RNA:protein ratio of the unicellular organism as a characteristic of phosphorous and nitrogen stoichiometry and of the cellular requirement of ribosomes for protein synthesis, Tatiana V. Karpinets, Duncan J. Greenwood, Carl E. Sams, and John T. Ammons
A statistical investigation of normal regional intra-subject heterogeneity of brain metabolism and perfusion by F-18 FDG and O-15 H2O PET imaging, Ching-yee O. Wong, Joseph Thie, Marianne Gaskill, Richard Ponto, Jack Hill, Hai-yan Tian, Helena Balon, Dafang Wu, Darlene Fink-Bennett, and Conrad Nagle
Statistical analysis of real-time PCR data, Joshua S. Yuan, Ann Reed, Feng Chen, and C. Neal Stewart
Submissions from 2005
Oogenesis in cultures derived from adult human ovaries, Antonin Bukovsky, Marta Svetlikova, and Michael R. Caudle
Efficient gene-driven germ-line point mutagenesis of C57BL/6J mice, Edward J. Michaud, Cymbeline T. Culiat, Mitchell L. Klebig, Paul E. Barker, KT Cain, Debra J. Carpenter, Lori L. Easter, Carmen M. Foster, Alysyn W. Gardner, ZY Guo, Kay J. Houser, Lori A. Hughes, Marilyn K. Kerley, Zhaowei Liu, Robert E. Olszewski, Irina Pinn, Ginger D. Shaw, Sarah G. Shinpock, Ann M. Wymore, Eugene M. Rinchik, and Dabney K. Johnson
Expression of G-protein inwardly rectifying potassium channels (GIRKs) in lung cancer cell lines, Howard Plummer 3rd; Madhu Dhar; Maria Cekanova MS, RNDr, PhD; and Hildegard Schuller
Expression of the α7 nicotinic acetylcholine receptor in human lung cells, Howard K. Plummer, Madhu Dhar, and Hildegard M. Schuller
Submissions from 2004
Reproductive Biology and Endocrinology – First year anniversary, Antonin Bukovsky
Origin of germ cells and formation of new primary follicles in adult human ovaries, Antonin Bukovsky, Michael R. Caudle, Marta Svetlikova, and Nirmala B. Upadhyaya
Expression of inwardly rectifying potassium channels (GIRKs) and beta-adrenergic regulation of breast cancer cell lines, Howard K. Plummer, Qiang Yu, Yavuz Cakir, and Hildegard M. Schuller
An SVD-based comparison of nine whole eukaryotic genomes supports a coelomate rather than ecdysozoan lineage, Gary W. Stuart and Michael W. Berry
Submissions from 2003
Expression and localization of estrogen receptor-alpha protein in normal and abnormal term placentae and stimulation of trophoblast differentiation by estradiol, A Bukovsky; Maria Cekanova MS, RNDr, PhD; MR Caudle; J Wimalasena; JS Foster; DC Henley; and RF Elder
Publish in Reproductive Biology and Endocrinology – Article processing charges are only paid by those who can afford it, Antonin Bukovsky and Fuller W. Bazer
Placental expression of estrogen receptor beta and its hormone binding variant – comparison with estrogen receptor alpha and a role for estrogen receptors in asymmetric division and differentiation of estrogen-dependent cells, Antonin Bukovsky, Michael R. Caudle, Maria Cekanova, Romaine I. Fernando, Jay Wimalasena, James S. Foster, Donald C. Henley, and Robert F. Elder
Placental expression of estrogen receptor beta and its hormone binding variant – comparison with estrogen receptor alpha and a role for estrogen receptors in asymmetric division and differentiation of estrogen-dependent cells, Antonin Bukovsky; Michael R. Caudle; Maria Cekanova MS, RNDr, PhD; Romaine I. Fernando; Jay Wimalasena; James S. Foster; Donald C. Henley; and Robert F. Elder
Expression and localization of estrogen receptor-alpha protein in normal and abnormal term placentae and stimulation of trophoblast differentiation by estradiol, Antonin Bukovsky, Maria Cekanova, Michael R. Caudle, Jay Wimalasena, James S. Foster, Donald C. Henley, and Robert F. Elder
Multiple luteinizing hormone receptor (LHR) protein variants, interspecies reactivity of anti-LHR mAb clone 3B5, subcellular localization of LHR in human placenta, pelvic floor and brain, and possible role for LHR in the development of abnormal pregnancy, pelvic floor disorders and Alzheimer's disease, Antonin Bukovsky, Korakod Indrapichate, Hiroshi Fujiwara, Maria Cekanova, Maria E. Ayala, Roberto Dominguez, Michael R. Caudle, Jay Wimalsena, Robert F. Elder, Pleas Copas, James S. Foster, Romaine I. Fernando, Donald C. Henley, and Nirmala B. Upadhyaya
Submissions from 2002
Variability of placental expression of cyclin E low molecular weight variants, A Bukovsky; Maria Cekanova MS, RNDr, PhD; MR Caudle; J Wimalasena; JS Foster; JA Keenan; and RF Elder
Fine mapping in tomato using microsynteny with the Arabidopsis genome: the Diageotropica (Dgt) locus, KwangChul Oh, Kristine Hardeman, Maria G. Ivanchenko, Mary Ellard-Ivey, Andreas Nebenfüh, TJ White, and Terri L. Lomax
Submissions from 2001
Association of mesenchymal cells and immunoglobulins with differentiating epithelial cells, Antonin Bukovsky, Michael R. Caudle, Jeffrey A. Keenan, Nirmala B. Upadhyaya, Stuart E. Van Meter, Jay Wimalsena, and Robert F. Elder
Abnormal expression of p27kip1 protein in levator ani muscle of aging women with pelvic floor disorders – a relationship to the cellular differentiation and degeneration, Antonin Bukovsky, Pleas Copas, Michael R. Caudle, Maria Cekanova, Tamara Dassanayake, Bridgett Asbury, Stuart E. Van Meter, Robert F. Elder, Jeffrey B. Brown, and Stephanie B. Cross