Date of Award
Doctor of Philosophy
Ohannes Karakashian, Steven Wise, Haixuan Xu
We introduce a new kinetic Monte Carlo (KMC) algorithm for off-lattice simulation. In off-lattice KMC one needs to calculate the rates for all possible moves from the current state by searching the energy landscape for index-1 saddle points surrounding the current basin of attraction. We introduce a rejection scheme where the true rates are replaced by rate estimates. This is done by first associating each saddle point with a key atom defined to be the atom that moves the most or that corresponds to the largest energy change if the transition were to take a place, then constructing an estimate for the total rate associated with each atom by using a nearest-neighbor bond count. These estimates allow one to select a set of possible transitions, one of which is accepted or rejected based on a localized saddle point search focused on a particular atom. In principle, this allows a performance boost that scales with the number of particles in the system. We test the method on a growing two-species nanocluster with an emerging core-shell structure bound by Lennard-Jones potential. In addition to that, we give a detailed review for the dimer method used in this study to locate index-1 saddle points on the potential energy surface.
Ruzayqat, Hamza Mahmoud, "Rejection Enhanced Off-Lattice Kinetic Monte Carlo. " PhD diss., University of Tennessee, 2019.