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  6. The role of MatP, ZapA and ZapB in chromosomal organization and dynamics in Escherichia coli
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The role of MatP, ZapA and ZapB in chromosomal organization and dynamics in Escherichia coli

Source Publication
Nucleic Acids Research
Date Issued
January 13, 2016
Author(s)
Männik, Jaana  
Castillo, Daniel E.
Yang, Da  
Siopsis, George  
Männik, Jaan  
DOI
10.1093/nar/gkv1484
Permanent URI
https://trace.tennessee.edu/handle/20.500.14382/50434
Abstract

Despite extensive research over several decades, a comprehensive view of how the Escherichia coli chromosome is organized within the nucleoid, and how two daughter chromosomes segregate has yet to emerge. Here we investigate the role of the MatP, ZapA and ZapB proteins in organizing the replication terminus (Ter) region and in the chromosomal segregation process. Quantitative image analysis of the fluorescently labeled Ter region shows that the replication terminus attaches to the divisome in a single segment along the perimeter of the cell in a MatP, ZapA and ZapB-dependent manner. The attachment does not significantly affect the bulk chromosome segregation in slow growth conditions. With or without the attachment, two chromosomal masses separate from each other at a speed comparable to the cell growth. The separation starts even before the replication terminus region positions itself at the center of the nucleoid. Modeling of the segregation based on conformational entropy correctly predicts the positioning of the replication terminus region within the nucleoid. However, the model produces a distinctly different chromosomal density distribution than the experiment, indicating that the conformational entropy plays a limited role in segregating the chromosomes in the late stages of replication.

Subjects

cell growth

chromosome segregatio...

chromosome structures...

chromosomes

constriction procedur...

entropy

escherichia coli

nucleoid

daughter

Disciplines
Physics
Comments

This article was published openly thanks to the University of Tennessee Open Publishing Support Fund.


Licensed under a Creative Commons Attribution 4.0 BY-NC license.

Recommended Citation
Männik, J., Castillo, D. E., Yang, D., Siopsis, G., & Männik, J. (2016). The role of MatP, ZapA and ZapB in chromosomal organization and dynamics in Escherichia coli. Nucleic Acids Research, 44(3), 1216-1226. doi: 10.1093/nar/gkv1484
Submission Type
Publisher's Version
File(s)
Thumbnail Image
Name

Nucl._Acids_Res._2016_Ma%CC%88nnik_1216_26.pdf

Size

3.09 MB

Format

Adobe PDF

Checksum (MD5)

8c037c7c2c40425b496056ed307561f0


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